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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61524045_61525035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61524045 - 61525035

Intron Length:

991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTATTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTTTATTA

Flanking Amino Acid:

EKIAPKEKGITSMSVKEILQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.7

0.69

0.9

82.3

34.1

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

61.1

0.34

1.5

69.94

37.5

Associated Gene:

Gene:

MND1

Ensembl Gene ID:

ENSAPLG00000002450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039389

61522621 - 61560649

38029

ENSAPLT00000021237

61522481 - 61560649

38169

ENSAPLT00000018972

61522621 - 61559660

37040

ENSAPLT00000002471

61522171 - 61560649

38479