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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61543209_61559416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61543209 - 61559416

Intron Length:

16208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

TCTTCTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCTAT

U12 Branch Point Sequence:

TCTTCTTCTATT

Flanking Amino Acid:

ECDPDVVEEMRQTNKIAKEA

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.4

62.5

43.9

Major BPS

61.5

0.29

1.3

62.1

44.1

Major PPT

87.3

0.84

0.7

85.3

27.7

Minor 5ss

35.4

-1.7

2.8

38.2

39.5

Minor BPS

55.4

0.25

1.9

75.66

41.6

Associated Gene:

Gene:

MND1

Ensembl Gene ID:

ENSAPLG00000002450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021237

61522481 - 61560649

38169

ENSAPLT00000018972

61522621 - 61559660

37040

ENSAPLT00000002471

61522171 - 61560649

38479

ENSAPLT00000039389

61522621 - 61560649

38029