Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_61607379_61608349_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61607379 - 61608349

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TTCTCTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATAAAGT

Flanking Amino Acid:

FHPSVLHFGMQLLGLPRAKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

73.7

35.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.5

0.87

0.6

88.4

21.3

Minor 5ss

39.4

-1.2

3.3

58.2

40.5

Minor BPS

48.1

-0

2.2

71.98

45.2

Associated Gene:

Gene:

TMEM131L

Ensembl Gene ID:

ENSAPLG00000002621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002692

61574941 - 61652026

77086

ENSAPLT00000019802

61607320 - 61654021

46702