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Intron Name: Anas_platyrhynchos_platyrhynchos_4_61622768_61623716_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
61622768 - 61623716

Intron Length:
949

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGCAT

5'SS Class:
major

3'SS Sequence:
TGTCCTTATCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATGAT

U12 Branch Point Sequence:
CTGTCCTTATCC

Flanking Amino Acid:
FTKVASISCKAASCDSESPY

Intron Amino Acid Position:
271

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.6
0.49
1.1
63.1
42.9

Major BPS
76.8
0.67
1
66
40.9

Major PPT
77.6
0.62
0.9
69.8
40.6

Minor 5ss
30.7
-2.2
3.6
46.8
48.5

Minor BPS
68.7
0.57
1.6
73.97
43.1

Associated Gene:

Gene:
TMEM131L

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

61574941 - 61652026
77086

61607320 - 61654021
46702