Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_61643118_61643892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61643118 - 61643892

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAAT

5'SS Class:

strong_major

3'SS Sequence:

AAAACCTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

TTTTCCAAAACC

Flanking Amino Acid:

SGSLSIQGETESFYQRSKKK

Intron Amino Acid Position:

1206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.7

35.4

Major BPS

69.4

0.48

71.6

33.8

Major PPT

61.1

0.25

0.9

56.2

39.9

Minor 5ss

47.1

-0.3

2.6

65.5

45.8

Minor BPS

66.7

0.5

1.9

83.65

35.8

Associated Gene:

Gene:

TMEM131L

Ensembl Gene ID:

ENSAPLG00000002621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002692

61574941 - 61652026

77086

ENSAPLT00000019802

61607320 - 61654021

46702