Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_61668326_61668588_F

Intron Information:

Intron Rank:

150315

Intron Class:

major

Intron Phase:

Intron Coordinates:

61668326 - 61668588

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACAAAAA

5'SS Class:

major

3'SS Sequence:

GTTGCAATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TTTGTTGCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.33

1.1

61.3

39.2

Major BPS

0.57

1.2

77.7

37.1

Major PPT

71.3

0.48

62.7

42.2

Minor 5ss

30.6

-2.2

3.1

30.8

42.9

Minor BPS

46.3

-0.2

2.2

70.72

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033688

61667658 - 61668594

937