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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62017130_62017317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62017130 - 62017317

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACCTTTTTAATT

Flanking Amino Acid:

ERSQPPGMSVAMMEAGGNKN

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.1

0.83

0.8

35.3

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

67.3

0.62

1.2

72.81

39.3

Associated Gene:

Gene:

PLRG1

Ensembl Gene ID:

ENSAPLG00000003763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003887

62008803 - 62021786

12984