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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62019525_62020537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62019525 - 62020537

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TATTGCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CAGTTATTAATA

Flanking Amino Acid:

YGHKQYSGNQGQELEYMITG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

1.2

78.8

38.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

80.3

0.68

0.8

77.9

36.1

Minor 5ss

39.2

-1.2

2.8

49.7

46.6

Minor BPS

55.5

0.17

1.6

60.9

39.6

Associated Gene:

Gene:

PLRG1

Ensembl Gene ID:

ENSAPLG00000003763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003887

62008803 - 62021786

12984