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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62025642_62027208_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
62025642 - 62027208

Intron Length:
1567

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTGTAATA

5'SS Class:
major

3'SS Sequence:
CCTGGCTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GACTCAA

U12 Branch Point Sequence:
CTAGACTCAAGA

Flanking Amino Acid:
SQASTDYDDEDESTVPEARG

Intron Amino Acid Position:
26

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.5
0.27
1.2
65.7
39.8

Major BPS
60.2
0.25
1.2
63.6
35.5

Major PPT
75.8
0.58
0.9
68.4
37.3

Minor 5ss
32.1
-2
3.1
41
44.9

Minor BPS
43.9
-0.4
2
53.21
44.8

Associated Gene:

Gene:
FGB

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

62025567 - 62032824
7258