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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62038823_62039111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62038823 - 62039111

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAC

U12 Branch Point Sequence:

CATAGCTGACCC

Flanking Amino Acid:

VIKPGLEGAQQLDENYGQVS

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

76.2

39.9

Major BPS

61.7

0.29

63.7

32.3

Major PPT

87.1

0.83

0.8

85.1

34.9

Minor 5ss

41.2

-1

2.8

50.4

39.3

Minor BPS

43.2

-0.5

2.1

53.03

44.1

Associated Gene:

Gene:

FGA

Ensembl Gene ID:

ENSAPLG00000004506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045316

62035860 - 62042186

6327

ENSAPLT00000004637

62035711 - 62042186

6476