Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_62049874_62050124_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62049874 - 62050124

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCGACCT

5'SS Class:

major

3'SS Sequence:

TTTTACTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTACTTTGAAG

Flanking Amino Acid:

GQQHTGSIKQATFLNSS*

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

61.3

43.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

78.6

0.64

79.7

32.3

Minor 5ss

29.9

-2.3

3.1

41.3

44.5

Minor BPS

61.7

0.22

1.6

68.42

Associated Gene:

Gene:

FGG

Ensembl Gene ID:

ENSAPLG00000004564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004702

62049649 - 62054591

4943