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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62053663_62053760_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
62053663 - 62053760

Intron Length:
98

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTGAGAATA

5'SS Class:
major

3'SS Sequence:
TTGTCTGTTTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATTAT

U12 Branch Point Sequence:
ATTATATTATCC

Flanking Amino Acid:
LYPPDKQQQQQSVEGFTQKS

Intron Amino Acid Position:
101

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.2
76.9
33.7

Major BPS
75.9
0.64
1
66.1
40.5

Major PPT
78.8
0.65
0.9
77.4
36.9

Minor 5ss
33
-1.9
3
39.7
39.2

Minor BPS
50.2
-0
1.9
66.56
38.6

Associated Gene:

Gene:
FGG

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

62049054 - 62054854
5801

62049649 - 62054591
4943