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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62065963_62068654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62065963 - 62068654

Intron Length:

2692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

AAAGTTAGAATA

Flanking Amino Acid:

ESIHSMNAYLGARPISRALD

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.8

38.1

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

86.6

0.82

0.7

85.4

29.4

Minor 5ss

-1.6

2.9

40.9

45.4

Minor BPS

41.6

-0.6

1.5

45.06

30.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029014

62061487 - 62119338

57852

ENSAPLT00000005147

62062920 - 62113676

50757