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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62070084_62071249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62070084 - 62071249

Intron Length:

1166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

GTTGTTTGAATG

Flanking Amino Acid:

RDEFDLLAAGSLAGHLIECG

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

74.6

0.61

1.4

34.5

Major PPT

76.9

0.61

0.9

68.5

42.1

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

49.9

-0.1

1.6

55.96

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029014

62061487 - 62119338

57852

ENSAPLT00000005147

62062920 - 62113676

50757