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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62079764_62082792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62079764 - 62082792

Intron Length:

3029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTAACTGCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGATTTTTAACT

Flanking Amino Acid:

FSEVSITEIPGFEGGAVKVH

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

73.9

42.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

68.3

0.41

39.6

Minor 5ss

34.2

-1.8

2.8

41.7

44.8

Minor BPS

77.2

0.93

1.1

85.13

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029014

62061487 - 62119338

57852

ENSAPLT00000005147

62062920 - 62113676

50757