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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62086823_62091064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62086823 - 62091064

Intron Length:

4242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTCTTTGAAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTCTTTGAAGC

Flanking Amino Acid:

GPHARRSIDGGPREAVIWLA

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

78.2

0.7

79.9

32.6

Major PPT

72.8

0.51

70.4

39.1

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

53.1

0.08

1.7

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029014

62061487 - 62119338

57852

ENSAPLT00000005147

62062920 - 62113676

50757