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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62464242_62484946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

62464242 - 62484946

Intron Length:

20705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTGCTTTTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.7

0.78

0.7

80.6

31.5

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

58.9

0.36

1.7

76.14

40.9

Associated Gene:

Gene:

GUCY1A1

Ensembl Gene ID:

ENSAPLG00000010971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047528

62464065 - 62498062

33998