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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62473638_62484946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

62473638 - 62484946

Intron Length:

11309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTGCTTTTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

75.1

40.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.7

0.78

0.7

80.6

31.5

Minor 5ss

42.8

-0.8

3.4

64.4

Minor BPS

58.9

0.36

1.7

76.14

40.9

Associated Gene:

Gene:

GUCY1A1

Ensembl Gene ID:

ENSAPLG00000010971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023117

62473476 - 62498062

24587