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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62485359_62488061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62485359 - 62488061

Intron Length:

2703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GATATTTTAATC

Flanking Amino Acid:

ESICKLIFPEFERLNLALQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.5

0.84

0.7

81.1

30.9

Minor 5ss

38.1

-1.3

49.1

46.7

Minor BPS

62.1

0.36

1.2

64.49

34.9

Associated Gene:

Gene:

GUCY1A1

Ensembl Gene ID:

ENSAPLG00000010971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047528

62464065 - 62498062

33998

ENSAPLT00000023117

62473476 - 62498062

24587

ENSAPLT00000011430

62473887 - 62498062

24176