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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62488124_62489360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62488124 - 62489360

Intron Length:

1237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

ATGATCTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATAT

Flanking Amino Acid:

TLAKHRIKETRKTGDREDFE

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.5

0.6

69.3

41.1

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

0.36

1.9

82.22

38.9

Associated Gene:

Gene:

GUCY1A1

Ensembl Gene ID:

ENSAPLG00000010971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011430

62473887 - 62498062

24176

ENSAPLT00000047528

62464065 - 62498062

33998

ENSAPLT00000023117

62473476 - 62498062

24587