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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62526353_62533887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62526353 - 62533887

Intron Length:

7535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTGT

5'SS Class:

major

3'SS Sequence:

ACTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

TTTTCCTTTATT

Flanking Amino Acid:

QIHGTEIDMKVIQQRNEECD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.3

39.7

Major BPS

74.8

0.62

1.1

40.5

Major PPT

84.2

0.77

0.7

77.4

36.3

Minor 5ss

38.5

-1.3

3.4

56.5

47.6

Minor BPS

81.6

1.08

1.4

96.2

29.4

Associated Gene:

Gene:

GUCY1B1

Ensembl Gene ID:

ENSAPLG00000011190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011675

62520297 - 62544838

24542

ENSAPLT00000048471

62520297 - 62544903

24607