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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62541598_62544814_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62541598 - 62544814

Intron Length:

3217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGACTA

5'SS Class:

strong_major

3'SS Sequence:

GCATGCACTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AATCCCTTACTT

Flanking Amino Acid:

FLSRKSTETEETKQDAF*

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.4

37.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

51.7

0.04

1.1

46.4

40.4

Minor 5ss

41.6

-0.9

3.1

56.3

47.8

Minor BPS

64.1

0.52

1.6

77.28

Associated Gene:

Gene:

GUCY1B1

Ensembl Gene ID:

ENSAPLG00000011190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011675

62520297 - 62544838

24542

ENSAPLT00000048471

62520297 - 62544903

24607