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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62600744_62601324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62600744 - 62601324

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

GTTTGTGTGACT

Flanking Amino Acid:

DIDVLMTKWRYNHVCMVHRM

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

75.2

35.8

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

63.9

0.31

62.5

43.4

Minor 5ss

-0.8

2.8

57.2

40.7

Minor BPS

48.3

-0

2.4

75.31

Associated Gene:

Gene:

TDO2

Ensembl Gene ID:

ENSAPLG00000012137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031358

62590255 - 62602778

12524

ENSAPLT00000023989

62592248 - 62602778

10531

ENSAPLT00000012648

62591427 - 62602778

11352