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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62612269_62613150_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62612269 - 62613150

Intron Length:

882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

GTTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ATATCCACAATA

Flanking Amino Acid:

ERETVAAALRESAKRVRFLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

68.7

37.6

Major BPS

0.75

78.6

Major PPT

86.4

0.82

0.7

85.6

29.2

Minor 5ss

32.1

-2

3.3

35.7

41.2

Minor BPS

54.8

0.15

1.8

68.47

37.4

Associated Gene:

Gene:

CTSO

Ensembl Gene ID:

ENSAPLG00000012445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012960

62605272 - 62613393

8122