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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62627713_62672390_F

Intron Information:

Intron Rank:

143143

Intron Class:

major

Intron Phase:

Intron Coordinates:

62627713 - 62672390

Intron Length:

44678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TCTTCTTTACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

79.5

29.5

Major BPS

0.6

65.6

41.1

Major PPT

83.2

0.75

0.8

76.4

32.4

Minor 5ss

47.6

-0.2

2.8

64.6

46.8

Minor BPS

0.66

1.6

78.6

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038360

62623329 - 62672547

49219