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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62805947_62860483_F

Intron Information:

Intron Rank:

138351

Intron Class:

major

Intron Phase:

Intron Coordinates:

62805947 - 62860483

Intron Length:

54537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTGA

5'SS Class:

major

3'SS Sequence:

CTTCCATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

CTTTCTTCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.4

37.6

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

82.9

0.74

0.8

76.9

30.4

Minor 5ss

45.8

-0.4

2.5

55.3

44.2

Minor BPS

52.9

0.17

75.4

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020672

62805384 - 62864098

58715