Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_62831846_62840479_R

Intron Information:

Intron Rank:

138137

Intron Class:

major

Intron Phase:

Intron Coordinates:

62831846 - 62840479

Intron Length:

8634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTCTTTTCTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

74.9

0.62

81.3

29.9

Major PPT

91.8

0.94

0.6

87.6

22.9

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

50.1

-0

1.8

66.5

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035268

62831044 - 62868169

37126