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Intron Name: Anas_platyrhynchos_platyrhynchos_4_62840700_62867332_R

Intron Information:

Intron Rank:

138138

Intron Class:

major

Intron Phase:

Intron Coordinates:

62840700 - 62867332

Intron Length:

26633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAGG

5'SS Class:

major

3'SS Sequence:

TGCTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTGAA

U12 Branch Point Sequence:

CCTGCTTCAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

66.4

45.1

Major BPS

61.6

0.29

1.2

55.4

Major PPT

86.1

0.81

0.8

84.1

30.9

Minor 5ss

38.4

-1.3

2.9

49.5

46.3

Minor BPS

47.5

-0.1

62.98

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035268

62831044 - 62868169

37126