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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63100651_63103059_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
63100651 - 63103059

Intron Length:
2409

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTCAG

5'SS Class:
major

3'SS Sequence:
CTTTTTTTTAAAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAGAAAT

U12 Branch Point Sequence:
TTTTTTTTAAAG

Flanking Amino Acid:
YDPRIRPNFKGIPVDVAVNI

Intron Amino Acid Position:
77

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.2
0.55
1.2
62.7
43.2

Major BPS
59.4
0.23
1.2
65.3
38.6

Major PPT
83.6
0.76
0.9
85.6
26.3

Minor 5ss
36
-1.6
2.6
41.2
45.2

Minor BPS
72.6
0.57
1.4
75.95
35.7

Associated Gene:

Gene:
GLRB

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63100362 - 63137600
37239

63089051 - 63137023
47973