Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_63103128_63111030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63103128 - 63111030

Intron Length:

7903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTGCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTATTTTTATT

Flanking Amino Acid:

SFGSIQETTMDYRVNIFLRQ

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

68.2

42.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.7

0.74

77.7

40.6

Minor 5ss

35.7

-1.6

3.2

45.4

43.6

Minor BPS

54.3

0.22

1.6

72.48

38.6

Associated Gene:

Gene:

GLRB

Ensembl Gene ID:

ENSAPLG00000012678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022657

63100362 - 63137600

37239

ENSAPLT00000013222

63089051 - 63137023

47973