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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63199974_63203500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63199974 - 63203500

Intron Length:

3527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCTAT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TTCTTTTTTACA

Flanking Amino Acid:

RDKVNDIVDQVITIGKHVKG

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.2

68.7

38.4

Major BPS

64.7

0.37

1.3

74.7

Major PPT

94.8

1.01

0.6

90.9

21.3

Minor 5ss

-0.2

2.5

64.8

46.5

Minor BPS

64.3

0.44

1.6

74.15

37.7

Associated Gene:

Gene:

GRIA2

Ensembl Gene ID:

ENSAPLG00000012953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046791

63155487 - 63242998

87512

ENSAPLT00000020283

63155487 - 63244906

89420

ENSAPLT00000013623

63155487 - 63244338

88852