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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63206582_63219060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63206582 - 63219060

Intron Length:

12479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CATTCCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTAATGAACT

Flanking Amino Acid:

YPGAHTSTIKYTSALTYDAV

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

100

1.24

0.5

100

Major PPT

83.9

0.76

0.8

80.9

30.7

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

57.1

0.3

1.9

80.74

39.9

Associated Gene:

Gene:

GRIA2

Ensembl Gene ID:

ENSAPLG00000012953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046791

63155487 - 63242998

87512

ENSAPLT00000020283

63155487 - 63244906

89420

ENSAPLT00000013623

63155487 - 63244338

88852