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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63241542_63242471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63241542 - 63242471

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTATCGTTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATGTTTTATCG

Flanking Amino Acid:

GIATPKGSSLRNAVNLAVLK

Intron Amino Acid Position:

764

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.5

38.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

70.2

0.46

1.1

67.9

42.4

Minor 5ss

25.2

-2.8

3.2

31.3

42.9

Minor BPS

-0

1.7

59.41

42.9

Associated Gene:

Gene:

GRIA2

Ensembl Gene ID:

ENSAPLG00000012953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013623

63155487 - 63244338

88852

ENSAPLT00000046791

63155487 - 63242998

87512