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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63516293_63517007_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
63516293 - 63517007

Intron Length:
715

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTAAGTTTT

5'SS Class:
major

3'SS Sequence:
TGTGCTTTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AACTGAT

U12 Branch Point Sequence:
GATGGCAAAACT

Flanking Amino Acid:
LDFKILQGINEFPESAVSVL

Intron Amino Acid Position:
480

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
81.6
33.2

Major BPS
74.7
0.61
0.9
63.4
35.6

Major PPT
81.8
0.72
0.9
73.1
42.1

Minor 5ss
47.4
-0.3
2.8
63.8
41.6

Minor BPS
42.8
-0.4
2.3
62.7
46.8

Associated Gene:

Gene:
GASK1B

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63458151 - 63529899
71749