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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63521688_63528615_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
63521688 - 63528615

Intron Length:
6928

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACATAT

5'SS Class:
major

3'SS Sequence:
TTTCCTTTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGGCAAT

U12 Branch Point Sequence:
AGTCTGGCAATT

Flanking Amino Acid:
SVSRKSEFFQAGQACPVILW

Intron Amino Acid Position:
333

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.5
0.7
1.1
77.7
33.3

Major BPS
48.6
-0
1.5
56.5
46.9

Major PPT
93.2
0.97
0.6
92.1
18.5

Minor 5ss
45.2
-0.5
3
64.8
46.5

Minor BPS
37.5
-0.8
2.4
56.22
40.4

Associated Gene:

Gene:
GASK1B

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63458151 - 63529899
71749