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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63660465_63662771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63660465 - 63662771

Intron Length:

2307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TGTGCATTCATT

Flanking Amino Acid:

VPSISSNITMMSLQRNLLRK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

82.6

0.73

0.8

76.7

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

49.6

0.05

2.1

73.64

43.4

Associated Gene:

Gene:

RXFP1

Ensembl Gene ID:

ENSAPLG00000014265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014860

63646039 - 63679703

33665

ENSAPLT00000037334

63659558 - 63679703

20146