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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63665227_63666006_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

63665227 - 63666006

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTATGTTAT

5'SS Class:

weak_major

3'SS Sequence:

CTGTAATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TTTGCTGTAATT

Flanking Amino Acid:

VFEDLHKLEWLIIENNRINR

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

36.6

Major BPS

0.72

80.3

31.7

Major PPT

76.4

0.59

40.7

Minor 5ss

53.1

0.11

2.5

76.1

39.5

Minor BPS

60.2

0.4

2.1

82.98

39.3

Associated Gene:

Gene:

RXFP1

Ensembl Gene ID:

ENSAPLG00000014265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014860

63646039 - 63679703

33665

ENSAPLT00000037334

63659558 - 63679703

20146