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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63666079_63667178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63666079 - 63667178

Intron Length:

1100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATTTTACTT

Flanking Amino Acid:

TFYGLKSLILLEMMNNSLAR

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

95.5

1.02

0.5

95.9

14.1

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

61.4

0.44

1.6

79.53

37.3

Associated Gene:

Gene:

RXFP1

Ensembl Gene ID:

ENSAPLG00000014265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037334

63659558 - 63679703

20146

ENSAPLT00000014860

63646039 - 63679703

33665