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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63674238_63675857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63674238 - 63675857

Intron Length:

1620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

ACTATGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

ATGATGTTAAGC

Flanking Amino Acid:

LHAISIMSLCCADCLMGIYL

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

76.8

0.67

40.9

Major PPT

0.36

0.9

57.8

37.9

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

45.3

-0.3

2.3

56.53

42.3

Associated Gene:

Gene:

RXFP1

Ensembl Gene ID:

ENSAPLG00000014265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037334

63659558 - 63679703

20146

ENSAPLT00000014860

63646039 - 63679703

33665