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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63677003_63679401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63677003 - 63679401

Intron Length:

2399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

GCTACTACAGCT

Flanking Amino Acid:

LLSLLQVEIPGTITSWVVIF

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.6

31.5

Major BPS

69.5

0.48

73.5

28.6

Major PPT

67.5

0.39

0.9

71.6

26.9

Minor 5ss

47.6

-0.2

2.4

62.3

42.5

Minor BPS

42.4

-0.5

1.9

58.88

43.9

Associated Gene:

Gene:

RXFP1

Ensembl Gene ID:

ENSAPLG00000014265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037334

63659558 - 63679703

20146

ENSAPLT00000014860

63646039 - 63679703

33665