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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63696396_63698129_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
63696396 - 63698129

Intron Length:
1734

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGATCG

5'SS Class:
strong_major

3'SS Sequence:
TGTCCTTCTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
AGGTACCTAACA

Flanking Amino Acid:
TNENLQSKTIGLDVQEYEEN

Intron Amino Acid Position:
377

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.9
0.94
0.8
75.1
35.8

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
78.5
0.64
0.8
73.7
31.3

Minor 5ss
38.3
-1.3
3
48.3
47.4

Minor BPS
52.7
0.08
1.9
64.83
40.8

Associated Gene:

Gene:
ETFDH

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63681519 - 63699986
18468

63683450 - 63699986
16537