Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_63710381_63710799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63710381 - 63710799

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

LHYKGCPFHRIIKQFMVQGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

PPID

Ensembl Gene ID:

ENSAPLG00000014725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015378

63700131 - 63712705

12575