Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_63746844_63747659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63746844 - 63747659

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TCGTTAGAAACA

Flanking Amino Acid:

KGSTLKIHYIRLQDSFEYIN

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.1

33.6

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

0.76

0.6

84.1

23.9

Minor 5ss

32.3

-2

3.3

44.3

43.6

Minor BPS

41.8

-0.6

2.4

55.13

44.2

Associated Gene:

Gene:

FNIP2

Ensembl Gene ID:

ENSAPLG00000015049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046555

63735513 - 63766791

31279