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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63921466_63957241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63921466 - 63957241

Intron Length:

35776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTAA

5'SS Class:

major

3'SS Sequence:

GCTCCACCTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTCTGCTCCACC

Flanking Amino Acid:

GYHTECTKPQLPADFTKLHL

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

66.4

0.37

0.8

58.5

Minor 5ss

42.2

-0.9

3.1

55.3

48.9

Minor BPS

47.5

-0.2

2.4

66.26

45.6

Associated Gene:

Gene:

RAPGEF2

Ensembl Gene ID:

ENSAPLG00000000967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047982

63821989 - 64000016

178028

ENSAPLT00000047378

63821989 - 64001023

179035

ENSAPLT00000033725

63821989 - 64001023

179035