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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63957374_63965539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63957374 - 63965539

Intron Length:

8166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TGCATTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

GSSSLSDIYQATESEAGDMD

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.8

0.36

63.5

41.9

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

RAPGEF2

Ensembl Gene ID:

ENSAPLG00000000967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018312

63934213 - 64001023

66811

ENSAPLT00000047378

63821989 - 64001023

179035

ENSAPLT00000001208

63876782 - 64001023

124242

ENSAPLT00000033725

63821989 - 64001023

179035

ENSAPLT00000027247

63821989 - 64000016

178028

ENSAPLT00000023917

63821989 - 64000016

178028

ENSAPLT00000047982

63821989 - 64000016

178028