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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63965718_63967471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63965718 - 63967471

Intron Length:

1754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGACATGCACG

Flanking Amino Acid:

DPIDRTDDDIEQLLEFMHQL

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

91.1

0.92

0.6

89.5

19.1

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

43.8

-0.6

2.2

54.42

45.9

Associated Gene:

Gene:

RAPGEF2

Ensembl Gene ID:

ENSAPLG00000000967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023917

63821989 - 64000016

178028

ENSAPLT00000047378

63821989 - 64001023

179035

ENSAPLT00000018312

63934213 - 64001023

66811

ENSAPLT00000046753

63821989 - 64001023

179035

ENSAPLT00000001208

63876782 - 64001023

124242

ENSAPLT00000033725

63821989 - 64001023

179035

ENSAPLT00000027247

63821989 - 64000016

178028

ENSAPLT00000047982

63821989 - 64000016

178028