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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63984878_63985143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63984878 - 63985143

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

TTTGTTTTTATA

Flanking Amino Acid:

KLADRIQLSGRYYLKNNMET

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

82.9

23.9

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

88.1

0.86

0.7

84.2

30.9

Minor 5ss

36.1

-1.6

3.2

46.9

48.4

Minor BPS

55.5

0.17

1.7

69.65

37.1

Associated Gene:

Gene:

RAPGEF2

Ensembl Gene ID:

ENSAPLG00000000967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027247

63821989 - 64000016

178028

ENSAPLT00000023917

63821989 - 64000016

178028

ENSAPLT00000047982

63821989 - 64000016

178028

ENSAPLT00000018312

63934213 - 64001023

66811

ENSAPLT00000047378

63821989 - 64001023

179035

ENSAPLT00000001208

63876782 - 64001023

124242

ENSAPLT00000046753

63821989 - 64001023

179035