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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63987367_63987456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63987367 - 63987456

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATGTTCTTAATT

Flanking Amino Acid:

IKKDLTFLHEGNDSKVEGLV

Intron Amino Acid Position:

1004

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.56

0.9

43.8

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

78.9

0.99

1.1

85.69

34.7

Associated Gene:

Gene:

RAPGEF2

Ensembl Gene ID:

ENSAPLG00000000967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018312

63934213 - 64001023

66811

ENSAPLT00000046753

63821989 - 64001023

179035

ENSAPLT00000001208

63876782 - 64001023

124242

ENSAPLT00000033725

63821989 - 64001023

179035

ENSAPLT00000027247

63821989 - 64000016

178028

ENSAPLT00000047982

63821989 - 64000016

178028

ENSAPLT00000023917

63821989 - 64000016

178028

ENSAPLT00000047378

63821989 - 64001023

179035