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Intron Name: Anas_platyrhynchos_platyrhynchos_4_63989648_63990536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63989648 - 63990536

Intron Length:

889

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGCATT

5'SS Class:

major

3'SS Sequence:

GTTTCTTGCGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TCATAGTCATTC

Flanking Amino Acid:

SLQCEPATNTLPKNTGDKRS

Intron Amino Acid Position:

1120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

79.9

34.9

Major BPS

0.67

1.1

77.7

37.1

Major PPT

65.2

0.34

1.1

67.3

38.2

Minor 5ss

42.3

-0.9

3.1

62.3

42.4

Minor BPS

38.3

-0.9

2.3

48.12

41.9

Associated Gene:

Gene:

RAPGEF2

Ensembl Gene ID:

ENSAPLG00000000967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018312

63934213 - 64001023

66811

ENSAPLT00000046753

63821989 - 64001023

179035

ENSAPLT00000001208

63876782 - 64001023

124242

ENSAPLT00000033725

63821989 - 64001023

179035

ENSAPLT00000027247

63821989 - 64000016

178028

ENSAPLT00000047982

63821989 - 64000016

178028

ENSAPLT00000023917

63821989 - 64000016

178028

ENSAPLT00000047378

63821989 - 64001023

179035