Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_64187689_64188857_F

Intron Information:

Intron Rank:

129161

Intron Class:

major

Intron Phase:

Intron Coordinates:

64187689 - 64188857

Intron Length:

1169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTACCTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

CTAACTTTGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

71.7

0.49

0.9

64.6

36.3

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

63.3

0.4

1.3

66.94

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021263

64187620 - 64204536

16917